PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G030900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 431aa    MW: 46131 Da    PI: 6.7866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G030900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.2e-053223591254
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Prupe.4G030900.1.p 322 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 359
                         677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973310359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.16E-6320364No hitNo description
SuperFamilySSF474597.72E-12320378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-9324367IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MAEEFQAGIC GSSWWNTSRH ALVASPCSVG FNDHIGSFGC PNDMVDIKAS RSSCGFDHSS  60
SPSSTPSDLN QALLLSRSGG GRAESNFHNS MLQEGVGVDE DSSSLIDGFK PMSQDFSLDQ  120
LGSSSSSGFP ITSSSSAANS YGFPSTLLQS IFDSEVSQPQ PQQSLFNNNH FSNDLLLPPS  180
PTSSCWPPRY SSSSCLRPSA VSLPKQLQPG GGGGGLHFPN NINTPFWNTP AATALNHGNS  240
IRSSNGLFSS SQSQYTAPAS SALVHEHKPN SHNFTPKGNT NEDVQDSNSV VKKSGSSMSS  300
CEPVFKRARI ETPSPLPTFK VRKEKLGDRI TALQQLVSPF GKTDTASVLH EAIEYIKFLH  360
EQVSVLSTPY MKNGAPMQHQ QGSDHKMKEA EGAKHDLKSR GLCLVPISST FPVANETTDF  420
WTPTFGATFR *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224896.10.0PREDICTED: transcription factor bHLH112 isoform X3
TrEMBLM5WU900.0M5WU90_PRUPE; Uncharacterized protein
STRINGVIT_00s0274g00070.t011e-127(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-54bHLH family protein